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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11129995 chr3:43216773 A/C DHX30 chr3:47844399-47891685:+ 0.91 7.79 6.3E-14 Box Plot
BLCA rs11129995 chr3:43216773 A/C EXOSC7 chr3:45016733-45077558:+ 0.76 7.44 6.69E-13 Box Plot
BLCA rs11129995 chr3:43216773 A/C FAM116A chr3:57611182-57678816:- 0.73 6.08 2.93E-9 Box Plot
BLCA rs11129995 chr3:43216773 A/C HEMK1 chr3:50606583-50633599:+ 0.62 5.96 5.72E-9 Box Plot
BLCA rs11129995 chr3:43216773 A/C IP6K1 chr3:49761727-49823975:- 0.77 6.74 6.0E-11 Box Plot
BLCA rs11129995 chr3:43216773 A/C KIAA1143 chr3:44779153-44803154:- 0.78 7.3 1.72E-12 Box Plot
BLCA rs11129995 chr3:43216773 A/C KLHL18 chr3:47324407-47388306:+ 0.81 6.27 9.8E-10 Box Plot
BLCA rs11129995 chr3:43216773 A/C PPP4R2 chr3:73045936-73118350:+ 0.47 6.09 2.75E-9 Box Plot
BLCA rs11129995 chr3:43216773 A/C QRICH1 chr3:49067140-49131796:- 0.89 7.53 3.62E-13 Box Plot
BLCA rs11129995 chr3:43216773 A/C SETD2 chr3:47057919-47205457:- 0.64 6.36 5.75E-10 Box Plot
BLCA rs11129995 chr3:43216773 A/C TMEM42 chr3:44903361-44907162:+ 0.65 6.01 4.42E-9 Box Plot
BLCA rs11129995 chr3:43216773 A/C TMF1 chr3:69068978-69101454:- 0.6 5.98 5.08E-9 Box Plot
BLCA rs11129995 chr3:43216773 A/C USP19 chr3:49145479-49158371:- 0.79 6.55 1.85E-10 Box Plot
BLCA rs11129995 chr3:43216773 A/C ZDHHC3 chr3:44956749-45017677:- 0.72 7.39 9.58E-13 Box Plot
BLCA rs11129995 chr3:43216773 A/C ZNF445 chr3:44473212-44519162:- 0.64 6.76 5.01E-11 Box Plot